miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|190237124|gb|FG710041.1|FG710041 AAGCAGTGGTATCAACGCAGAGTGGTCATTACGGCCGGGGTTTGGAATATTTAACAGCCTTTGGTTTTCCCTGGGTGCCT
TTATGCAGCAAGGATGCGATATTTCTCCAAGATCTCTCTCAGGGCGAATTGTCGGAGGCGTCTGGTGGTTCTTCACCCTC
ATCATTATCTCCTCCTACACTGCCAACCTCGCGGCCTTCCTGACGGTGGAAAGGATGGTGTCTCCCATAGAAAGTGCCGA
AGACTTGGCTAAGCAGACTGAAATTGCCTACGGAACTTTGGACTCAGGATCAACCAAAGAATTTTTTAGAAGATCCAAAA
TAGCCGTCTATGAGAAAATGTGGTCATACATGAAGTCGGCCGAGCCGTCTGTCTTTGCCAAAACCACGGCGGACGGAGTG
GCGCGCGTGAGGAAATCAAAGGGGAAGTTTGCCTTCCTGCTCGAATCGACCATGAATGAGTACATTGAACAACGAAAGCC
CTGTGACACAGTGAAAGTTGGTGGGAACCTGGATTCCAAAGGCTATGGTGTAGCAACTCCCAAAGGCTCAGCATTAGGGT
GGGTGGAATAATATAACAATATCCATGTTGTTGTAGTATTCCACCTACCCTGATGTATTGTGTTGTCTTTTTCTTTCTTG
TGAATTTGAGGTAAACTTAAACAAGTTTTCAAAACAAATTCTTAACAGTATTACATGGAGTTAAATAAGACGGTAAATTA
TGGTTTCATTGACTTTTAATGCATCCATTTTTTTTTCTAAGTGTTCTCTCGTGTTGTCCTTTCTGATTGTTTGTTGCTGG
TTTTTCTTTTATTTTACAGTCCAGTGGCTTTTTTCAATTTAGATGGTAAAGCCGAGTTTAAAACTGCCATACGTG




Most similar to sp|P19492|GRIA3_RAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
            GN=Gria3 PE=1 SV=1
          Length = 888

 Score =  344 bits (883), Expect = 4e-94
 Identities = 171/173 (98%), Positives = 172/173 (99%)
 Frame = +2

Query: 41   FGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMV 220
            FGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMV
Sbjct: 597  FGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMV 656

Query: 221  SPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFAKTTADGV 400
            SPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVF KTTADGV
Sbjct: 657  SPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTTADGV 716

Query: 401  ARVRKSKGKFAFLLESTMNEYIEQRKPCDTVKVGGNLDSKGYGVATPKGSALG 559
            ARVRKSKGKFAFLLESTMNEYIEQRKPCDT+KVGGNLDSKGYGVATPKGSALG
Sbjct: 717  ARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALG 769